Journal papers

  1. A. Liwo, A. K. Sieradzan, A. G. Lipska, C. Czaplewski, I. Joung, W. Żmudzińska, A. Hałabis, S. Ołdziej. A general method for the derivation of the functional forms of the effective energy terms in coarse-grained energy functions of polymers. III. Determination of scale-consistent backbone-local and correlation potentials in the UNRES force field and force-field calibration and validation. J. Chem. Phys., 2019, submitted.

  2. E. Lubecka, A. Liwo. Use of contact-distance restraints in the prediction of protein structures with the UNRES force field. J. Comput. Chem., 2019, submitted.

  3. E. Lubecka, A. K. Sieradzan, C. Czaplewski, P. Krupa, A. Liwo. High performance computing with coarse grained model of biological macromolecules. Supercomputing Frontiers and Innovations, 2018, 5, 63-67, doi: 10.14529/jsfi180206.

  4. C. Czaplewski, A. Karczyńska, A.K. Sieradzan, A. Liwo. UNRES server for physics-based coarse-grained simulations and prediction of protein structure, dynamics and thermodynamics. Nucleic Acids Research, 2018, 46, W304-W309, doi: 10.1093/nar/gky328.


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